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Melbourne/Software

From IGEM07

< Melbourne

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  • Used for GVP component:
    • NCBI core nucleotide database for Gvp AF053765
    • BLAST
    • ORF prediction
    • pI & MW (Expasy)
    • NEB cutter 2.0
    • , Colostate Graphical map
    • locate possible silent mutations introducing restriction sites
    • Restriction fragments of Linear sequences only
    • Restriction fragments of circular sequences unfortunately verbose
    • (CLC)
    • oligo analyzer
    • Codon usage database
    • Reverse Complement DNA

Translation tool

  • Used for Blue light receptor component:


  • Other usefull sites:
    • List of gene finding tools
    • BLAST alternatives (NCBI)
    • Profiling Ecoli chromosome
    • Chemfinder
    • Clustal W alignment
    • DAS transmembrane prediction
    • pubmed
    • mybio tools
    • EXPASY
    • http://www.arabidopsis.org/
    • http://www.yeastgenome.org/
    • Ecoli database portal
Retrieved from "http://parts.mit.edu/igem07/index.php/Melbourne/Software"
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  • This page was last modified 03:26, 16 July 2007.
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